ACSS1 acyl-CoA synthetase short chain family member 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ACSS1provided by VGNC
Official Full Name: acyl-CoA synthetase short chain family member 1provided by VGNC
Primary source: VGNC:VGNC:51749
Locus tag: CK820_G0035250
See related: Ensembl:ENSPTRG00000013336
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	21	NC_072419.2 (31533281..31587779, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	20	NC_072418.1 (31565029..31619438, complement)

Chromosome 21 - NC_072419.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D20S1043 (e-PCR)
- UniSTS:81933

AL030974 (e-PCR)
- UniSTS:75446

WI-11267 (e-PCR)
- UniSTS:14325

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables AMP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables acetate-CoA ligase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in acetyl-CoA biosynthetic process from acetate	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: acetyl-coenzyme A synthetase 2-like, mitochondrial

XP_001149851.1

EC 6.2.1.1

XP_009435223.1

EC 6.2.1.1

XP_016793067.1

EC 6.2.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

31533281..31587779 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001149851.7 → XP_001149851.1 acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A2I3RG26, A0A2J8KX31, A0A6D2WB99, H2QK41

Related

ENSPTRP00000022860.2

Conserved Domains (1) summary

TIGR02188
Location:53 → 675

Ac_CoA_lig_AcsA; acetate--CoA ligase
XM_009436948.4 → XP_009435223.1 acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X2

Conserved Domains (2) summary

PLN03051
Location:1 → 486

PLN03051; acyl-activating enzyme; Provisional

cl17068
Location:1 → 496

AFD_class_I; Adenylate forming domain, Class I superfamily
XM_016937578.3 → XP_016793067.1 acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X3

UniProtKB/TrEMBL

A0A2I3SIZ4, A0A2J8KX30, A0A6D2X5E1

Related

ENSPTRP00000076977.1

Conserved Domains (1) summary

cl27677
Location:23 → 555

PRK07788; acyl-CoA synthetase; Validated