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ABCC9 ATP binding cassette subfamily C member 9 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465338, updated on 29-Mar-2024

Summary

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Official Symbol
ABCC9provided by VGNC
Official Full Name
ATP binding cassette subfamily C member 9provided by VGNC
Primary source
VGNC:VGNC:12752
Locus tag
CK820_G0019084
See related
Ensembl:ENSPTRG00000004764
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (73585588..73728746)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (72202200..72345221)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene histone-lysine N-methyltransferase SETMAR-like Neighboring gene uncharacterized LOC134807487 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene lactate dehydrogenase B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfonylurea receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family C member 9
Names
ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ATP-binding cassette, sub-family C, member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    73585588..73728746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009425746.4 → XP_009424021.1  ATP-binding cassette sub-family C member 9 isoform X1

    See identical proteins and their annotated locations for XP_009424021.1

    UniProtKB/TrEMBL
    A0A2J8QRA7, A0A6D2Y7N6, H2RD79, K7BCK3
    Related
    ENSPTRP00000084549.1
    Conserved Domains (1) summary
    TIGR00957
    Location:222 → 1546
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

  2. XM_063785876.1 → XP_063641946.1  ATP-binding cassette sub-family C member 9 isoform X3

  3. XM_016923817.4 → XP_016779306.1  ATP-binding cassette sub-family C member 9 isoform X5

    UniProtKB/TrEMBL
    H2RD79

  4. XM_009425747.4 → XP_009424022.1  ATP-binding cassette sub-family C member 9 isoform X2

    See identical proteins and their annotated locations for XP_009424022.1

    UniProtKB/TrEMBL
    A0A2I3S6S2, A0A2J8QRA6, A0A6D2WIT3, H2RD79
    Related
    ENSPTRP00000072667.1
    Conserved Domains (1) summary
    cl26602
    Location:222 → 1541
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  5. XM_009425749.4 → XP_009424024.1  ATP-binding cassette sub-family C member 9 isoform X4

    See identical proteins and their annotated locations for XP_009424024.1

    UniProtKB/TrEMBL
    H2RD79
    Related
    ENSPTRP00000058431.2
    Conserved Domains (4) summary
    cd03288
    Location:1297 → 1536
    ABCC_SUR2; ATP-binding cassette domain 2 of the sulfonylurea receptor SUR
    cd03290
    Location:672 → 876
    ABCC_SUR1_N; ATP-binding cassette domain of the sulfonylurea receptor, subfamily C
    TIGR01271
    Location:221 → 1521
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:985 → 1219
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
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