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ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A [ Pan troglodytes (chimpanzee) ]

Gene ID: 462632, updated on 29-Mar-2024

Summary

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Official Symbol
ANKS1Aprovided by VGNC
Official Full Name
ankyrin repeat and sterile alpha motif domain containing 1Aprovided by VGNC
Primary source
VGNC:VGNC:2640
Locus tag
CK820_G0007046
See related
Ensembl:ENSPTRG00000018076
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (40762798..40965538)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (40762803..40965544)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene uncharacterized LOC134810196 Neighboring gene TATA-box binding protein associated factor 11 Neighboring gene 10 kDa heat shock protein, mitochondrial-like Neighboring gene uncharacterized LOC129144243 Neighboring gene t-complex 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SAM domain-containing protein 1A
Names
ankyrin repeat and sterile alpha motif domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    40762798..40965538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_518420.8 → XP_518420.3  ankyrin repeat and SAM domain-containing protein 1A isoform X9

    UniProtKB/TrEMBL
    A0A2J8NYW2, A0A2J8NYW4, A0A6D2VV32, H2QSV4
    Related
    ENSPTRP00000030873.4
    Conserved Domains (6) summary
    cd09499
    Location:697 → 763
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:768 → 832
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 202
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:926 → 1071
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:80 → 110
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:251 → 290
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_024357155.3 → XP_024212923.1  ankyrin repeat and SAM domain-containing protein 1A isoform X5

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (6) summary
    cd09499
    Location:718 → 784
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:789 → 853
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:947 → 1093
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:272 → 311
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_063812380.1 → XP_063668450.1  ankyrin repeat and SAM domain-containing protein 1A isoform X4

  4. XM_024357154.3 → XP_024212922.1  ankyrin repeat and SAM domain-containing protein 1A isoform X3

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (6) summary
    cd09499
    Location:718 → 784
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:789 → 853
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:947 → 1093
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:272 → 311
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_009451083.5 → XP_009449358.1  ankyrin repeat and SAM domain-containing protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (7) summary
    cd09499
    Location:718 → 784
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:789 → 853
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:721 → 780
    SAM; Sterile alpha motif
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:947 → 1093
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:207 → 298
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]

  6. XM_009451084.5 → XP_009449359.1  ankyrin repeat and SAM domain-containing protein 1A isoform X2

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (7) summary
    cd09499
    Location:718 → 784
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:789 → 853
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:721 → 780
    SAM; Sterile alpha motif
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:947 → 1092
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:207 → 298
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]

  7. XM_024357158.3 → XP_024212926.1  ankyrin repeat and SAM domain-containing protein 1A isoform X10

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (5) summary
    cd09499
    Location:684 → 750
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:755 → 819
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:913 → 1059
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]

  8. XM_024357157.3 → XP_024212925.1  ankyrin repeat and SAM domain-containing protein 1A isoform X7

    UniProtKB/TrEMBL
    A0A2J8NYW2
    Conserved Domains (6) summary
    cd09499
    Location:697 → 763
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:768 → 832
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 202
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:926 → 1072
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:80 → 110
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:251 → 290
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_024357156.3 → XP_024212924.1  ankyrin repeat and SAM domain-containing protein 1A isoform X6

    UniProtKB/TrEMBL
    A0A2J8NYW2, A0A2J8NYW9
    Conserved Domains (6) summary
    cd09499
    Location:718 → 784
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:789 → 853
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd00204
    Location:74 → 223
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:947 → 1092
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:169 → 200
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:272 → 311
    Ank_2; Ankyrin repeats (3 copies)

  10. XM_009451089.5 → XP_009449364.1  ankyrin repeat and SAM domain-containing protein 1A isoform X8

    UniProtKB/TrEMBL
    A0A2I3T113, A0A2J8NYW2
    Related
    ENSPTRP00000082543.1
    Conserved Domains (7) summary
    cd09499
    Location:697 → 763
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:768 → 832
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    smart00454
    Location:700 → 759
    SAM; Sterile alpha motif
    cd00204
    Location:74 → 202
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01274
    Location:926 → 1071
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    pfam12796
    Location:186 → 277
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:80 → 110
    ANK; ANK repeat [structural motif]

  11. XM_063812382.1 → XP_063668452.1  ankyrin repeat and SAM domain-containing protein 1A isoform X11

  12. XM_063812383.1 → XP_063668453.1  ankyrin repeat and SAM domain-containing protein 1A isoform X12

Nucleotide Protein
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