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ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456558, updated on 29-Mar-2024

Summary

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Official Symbol
ATPAF1provided by VGNC
Official Full Name
ATP synthase mitochondrial F1 complex assembly factor 1provided by VGNC
Primary source
VGNC:VGNC:57560
Locus tag
CK820_G0025672
See related
Ensembl:ENSPTRG00000043035
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (184293469..184329242)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (46970061..47005819, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily B member 1 Neighboring gene EF-hand calcium binding domain 14 Neighboring gene testis expressed 38 Neighboring gene MOB kinase activator 3C Neighboring gene MAPK interacting serine/threonine kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial proton-transporting ATP synthase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase mitochondrial F1 complex assembly factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    184293469..184329242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016962454.4 → XP_016817943.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TS30, A0A2J8M0B0, A0A6D2XTR0, K7CCF1
    Related
    ENSPTRP00000083009.1
    Conserved Domains (1) summary
    pfam06644
    Location:100 → 330
    ATP11; ATP11 protein

  2. XM_016962475.4 → XP_016817964.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RMU7, A0A2I3TS30, A0A2J8M0G7, A0A6D2WJS2
    Related
    ENSPTRP00000065964.1
    Conserved Domains (1) summary
    pfam06644
    Location:100 → 262
    ATP11; ATP11 protein

  3. XM_016962465.4 → XP_016817954.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TS30

  4. XM_016962469.4 → XP_016817958.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3TS30

  5. XM_016962481.3 → XP_016817970.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A2I3SCD7, A0A2I3SSK7, A0A2J8M0B3, A0A6D2XGX0
    Related
    ENSPTRP00000074698.1
    Conserved Domains (1) summary
    pfam06644
    Location:32 → 219
    ATP11; ATP11 protein
Nucleotide Protein
Heading Accession and Version

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