AQP4 aquaporin 4 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: AQP4provided by VGNC
Official Full Name: aquaporin 4provided by VGNC
Primary source: VGNC:VGNC:5142
Locus tag: CK820_G0018675
See related: Ensembl:ENSPTRG00000009936
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	17	NC_072415.2 (36697858..36711619, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	18	NC_072416.1 (35620995..35634770, complement)

Chromosome 17 - NC_072415.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D18S1195 (e-PCR)
- UniSTS:42497

D18S941E (e-PCR)
- UniSTS:150533

AQP4_717 (e-PCR)
- UniSTS:277005

AQP4_V79 (e-PCR)
- UniSTS:277005

RH25921 (e-PCR)
- UniSTS:85531

D18S1223 (e-PCR)
- UniSTS:70969

A006W40 (e-PCR)
- UniSTS:3912

SHGC-36589 (e-PCR)
- UniSTS:83072

RH121996 (e-PCR)
- UniSTS:132249

Aqp4 (e-PCR), detects polymorphism
- UniSTS:209565

WI-13598 (e-PCR)
- UniSTS:77734

A002Q03 (e-PCR)
- UniSTS:56496

D18S1223 (e-PCR)
- UniSTS:79853

WI-21214 (e-PCR)
- UniSTS:3054

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables water channel activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in water transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in basolateral plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: aquaporin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072415.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

36697858..36711619 complement

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GenBank, FASTA, Sequence Viewer (Graphics)