ATP2C2 ATPase secretory pathway Ca2+ transporting 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ATP2C2provided by VGNC
Official Full Name: ATPase secretory pathway Ca2+ transporting 2provided by VGNC
Primary source: VGNC:VGNC:9001
Locus tag: CK820_G0029414
See related: Ensembl:ENSPTRG00000008417
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 29

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	18	NC_072416.2 (82531590..82625514)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	16	NC_072414.1 (82531434..82628494)

Chromosome 18 - NC_072416.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

SHGC-60885 (e-PCR)
- UniSTS:67914

RH65309 (e-PCR)
- UniSTS:87900

STS-N48584 (e-PCR)
- UniSTS:14264

RH36547 (e-PCR)
- UniSTS:185

SGC31818 (e-PCR)
- UniSTS:99832

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info	PubMed
enables P-type calcium transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in calcium ion transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intracellular calcium ion homeostasis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in manganese ion transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: calcium-transporting ATPase type 2C member 2

Names: ATPase, Ca++ transporting, type 2C, member 2

XP_003315263.4

EC 7.2.2.10

XP_016785777.3

EC 7.2.2.10

XP_054524500.1

EC 7.2.2.10

XP_511142.6

EC 7.2.2.10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

82531590..82625514

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_511142.8 → XP_511142.6 calcium-transporting ATPase type 2C member 2 isoform X2
XM_003315215.6 → XP_003315263.4 calcium-transporting ATPase type 2C member 2 isoform X4
XM_054668525.2 → XP_054524500.1 calcium-transporting ATPase type 2C member 2 isoform X1
XM_016930288.3 → XP_016785777.3 calcium-transporting ATPase type 2C member 2 isoform X3