AP3S2 adaptor related protein complex 3 subunit sigma 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Gene symbol: AP3S2
Gene description: adaptor related protein complex 3 subunit sigma 2
See related: Ensembl:ENSPTRG00000007442
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	16	NC_072414.2 (81628474..81687244, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	15	NC_072413.1 (81603208..81668376, complement)

Chromosome 16 - NC_072414.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D15S1091 (e-PCR)
- UniSTS:75267

D15S1443E (e-PCR)
- UniSTS:474372

G17841 (e-PCR)
- UniSTS:54533

D8S2278 (e-PCR)
- UniSTS:473906

D8S2279 (e-PCR)
- UniSTS:473907

D15S223E (e-PCR)
- UniSTS:473189

D11S3114 (e-PCR)
- UniSTS:152207

WI-20835 (e-PCR)
- UniSTS:68524

RH11326 (e-PCR)
- UniSTS:56765

D15S526 (e-PCR)
- UniSTS:10430

D11S3316 (e-PCR)
- UniSTS:152558

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in Golgi to vacuole transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intracellular protein transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of AP-3 adaptor complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info	PubMed
part_of membrane coat	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: AP-3 complex subunit sigma-2

Names: adaptor related protein complex 3 sigma 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001242425.3 → NP_001229354.1 AP-3 complex subunit sigma-2

See identical proteins and their annotated locations for NP_001229354.1

Status: VALIDATED

Source sequence(s)

JAQQLN020000016

UniProtKB/TrEMBL

A0A2I3T051, K7DCI4

Conserved Domains (1) summary

cd14834
Location:1 → 146

AP3_sigma; AP-3 complex subunit sigma

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

81628474..81687244 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009429760.5 → XP_009428035.1 AP-3 complex subunit sigma-2 isoform X1

See identical proteins and their annotated locations for XP_009428035.1

UniProtKB/TrEMBL

A0A2I3T051, H2QA27

Related

ENSPTRP00000012726.5

Conserved Domains (1) summary

COG5030
Location:1 → 160

APS2; Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]
XM_009429761.5 → XP_009428036.1 AP-3 complex subunit sigma-2 isoform X2

Conserved Domains (1) summary

cd14834
Location:1 → 129

AP3_sigma; AP-3 complex subunit sigma