angptl7 angiopoietin-like 7 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: angptl7provided by ZNC
Official Full Name: angiopoietin-like 7provided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-175
See related: Ensembl:ENSDARG00000027582 AllianceGenome:ZFIN:ZDB-GENE-041010-175
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101687
Summary: Predicted to enable signaling receptor binding activity. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including chordo neural hinge; fin; median fin fold; musculature system; and pectoral fin bud. Orthologous to human ANGPTL7 (angiopoietin like 7). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (46217903..46221284)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (46210024..46213405)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in collagen-containing extracellular matrix	IBA Inferred from Biological aspect of Ancestor more info
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: angiopoietin-related protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001006073.1 → NP_001006073.1 angiopoietin-related protein 7 precursor

See identical proteins and their annotated locations for NP_001006073.1

Status: PROVISIONAL

Source sequence(s)

BC083248

UniProtKB/TrEMBL

A0A0R4IFD7, A0A8M1N2V3, Q5XJQ0

Related

ENSDARP00000028352.7, ENSDART00000038790.9

Conserved Domains (1) summary

cd00087
Location:122 → 333

FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...