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zgc:101772 zgc:101772 [ Danio rerio (zebrafish) ]

Gene ID: 447886, updated on 11-Apr-2024

Summary

Official Symbol
zgc:101772provided by ZNC
Official Full Name
zgc:101772provided by ZNC
Primary source
ZFIN:ZDB-GENE-040912-51
See related
AllianceGenome:ZFIN:ZDB-GENE-040912-51
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be a structural constituent of myelin sheath. Predicted to be involved in myelination. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including cranial ganglion; hatching gland; mucus secreting cell; olfactory system; and pronephric duct. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
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Genomic context

Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 17 Unlocalized Scaffold (ALT_DRER_TU_1) NW_018394986.1 (361058..364992)

NW_018394986.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100537077 Neighboring gene nephronophthisis 1 Neighboring gene mitochondrial ribosomal protein S5 Neighboring gene uncharacterized LOC103908810

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018394986.1 Chromosome 17 Reference GRCz11 ALT_DRER_TU_1

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of myelin sheath IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in myelination IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein LOC447886
Names
T-lymphocyte maturation-associated protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004625.1NP_001004625.1  uncharacterized protein LOC447886

    See identical proteins and their annotated locations for NP_001004625.1

    Status: PREDICTED

    Source sequence(s)
    BC081401
    UniProtKB/TrEMBL
    Q66ID0
    Conserved Domains (1) summary
    pfam01284
    Location:18151
    MARVEL; Membrane-associating domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394986.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    361058..364992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)