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ACBD6 acyl-CoA binding domain containing 6 [ Gallus gallus (chicken) ]

Gene ID: 424416, updated on 5-Mar-2024

Summary

Official Symbol
ACBD6provided by CGNC
Official Full Name
acyl-CoA binding domain containing 6provided by CGNC
Primary source
CGNC:2876
See related
Ensembl:ENSGALG00010010849
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
LHX4-AS1
Orthologs
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Genomic context

Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (5909710..5976752)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (5921520..5988267)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene KIAA1614 Neighboring gene xenotropic and polytropic retrovirus receptor 1 Neighboring gene uncharacterized LOC121111411 Neighboring gene LIM homeobox 4 Neighboring gene quiescin Q6 sulfhydryl oxidase 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
acyl-CoA-binding domain-containing protein 6
Names
LHX4 antisense RNA 1
acyl-Coenzyme A binding domain containing 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277547.2NP_001264476.1  acyl-CoA-binding domain-containing protein 6

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000237
    UniProtKB/TrEMBL
    E1C483
    Related
    ENSGALP00010014631.1, ENSGALT00010025970.1
    Conserved Domains (4) summary
    cd00204
    Location:151247
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00887
    Location:30109
    ACBP; Acyl CoA binding protein
    pfam12796
    Location:152241
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:177208
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5909710..5976752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025152811.3XP_025008579.2  acyl-CoA-binding domain-containing protein 6 isoform X1

    Conserved Domains (3) summary
    sd00045
    Location:177208
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:178219
    Ank_4; Ankyrin repeats (many copies)
    cl00221
    Location:28111
    ACBP; Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a ...
  2. XM_015290280.4XP_015145766.1  acyl-CoA-binding domain-containing protein 6 isoform X2

    Conserved Domains (4) summary
    cd00204
    Location:151207
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00887
    Location:30109
    ACBP; Acyl CoA binding protein
    pfam13637
    Location:148198
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:177207
    ANK; ANK repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5921520..5988267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046922515.1XP_046778471.1  acyl-CoA-binding domain-containing protein 6 isoform X1

  2. XM_046922517.1XP_046778473.1  acyl-CoA-binding domain-containing protein 6 isoform X2