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mRpS10 mitochondrial ribosomal protein S10 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41838, updated on 4-Apr-2024

Summary

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Official Symbol
mRpS10provided by FlyBase
Official Full Name
mitochondrial ribosomal protein S10provided by FlyBase
Primary source
FLYBASE:FBgn0038307
Locus tag
Dmel_CG4247
See related
AllianceGenome:FB:FBgn0038307
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:GM25447; CG4247; Dmel\CG4247; MRP-S10; MrpS10
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be part of mitochondrial small ribosomal subunit. Predicted to be active in mitochondrion. Is expressed in several structures, including adult heart; embryonic/larval muscle system; extended germ band embryo; and gut section. Orthologous to human MRPS10 (mitochondrial ribosomal protein S10). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
88E3-88E3; 3-56 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15229665..15230516)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11055387..11056238)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Chromatin assembly factor 1, p55 subunit Neighboring gene Arginine methyltransferase 3 Neighboring gene antisense RNA:CR43471 Neighboring gene uncharacterized protein Neighboring gene telomere fusion

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Confirming candidate genes for longevity by RT-qPCR using two different genetic backgrounds and selection methods. Wit J, et al. J Insect Physiol, 2013 Mar. PMID 23357090
  2. TRPM channels mediate zinc homeostasis and cellular growth during Drosophila larval development. Georgiev P, et al. Cell Metab, 2010 Oct 6. PMID 20889130
  3. A proteomics approach to the identification of mammalian mitochondrial small subunit ribosomal proteins. Koc EC, et al. J Biol Chem, 2000 Oct 20. PMID 10938081
  4. The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. Cavdar Koc E, et al. J Biol Chem, 2001 Jun 1. PMID 11279123
  5. Discovery and Visualization of Age-Dependent Patterns in the Diurnal Transcriptome of Drosophila. Sebastian B, et al. J Circadian Rhythms, 2022. PMID 36561348, Free PMC Article

See all (34) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
part_of mitochondrial small ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
mitochondrial ribosomal protein S10
Names
CG4247-PA
CG4247-PB
mRpS10-PA
mRpS10-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15229665..15230516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169624.3 → NP_731985.2  mitochondrial ribosomal protein S10, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731985.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1B2AKZ2
    Related
    FBpp0082512
    Conserved Domains (1) summary
    pfam00338
    Location:47 → 144
    Ribosomal_S10; Ribosomal protein S10p/S20e

  2. NM_079631.4 → NP_524355.2  mitochondrial ribosomal protein S10, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524355.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8JR11, Q8IH25, Q8INE7, Q8SYL8, Q9VFB2
    Related
    FBpp0082513
    Conserved Domains (1) summary
    pfam00338
    Location:57 → 154
    Ribosomal_S10; Ribosomal protein S10p/S20e
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VFB2.2 Q9VFB2

Gene LinkOut

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