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ALG12 ALG12, alpha-1,6-mannosyltransferase [ Gallus gallus (chicken) ]

Gene ID: 417733, updated on 3-Apr-2024

Summary

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Official Symbol
ALG12provided by CGNC
Official Full Name
ALG12, alpha-1,6-mannosyltransferaseprovided by CGNC
Primary source
CGNC:50582
See related
Ensembl:ENSGALG00010009003
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
alpha-1; 6-mannosyltransferase)
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (19055339..19099213, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (19286961..19330803, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107049439 Neighboring gene bromodomain containing 1 Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene uncharacterized LOC112533145 Neighboring gene uncharacterized LOC112533147

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression profiling of chicken primordial germ cell ESTs. Han JY, et al. BMC Genomics, 2006 Aug 30. PMID 16939661, Free PMC Article
  2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  3. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Names
6-mannosyltransferase ALG12
alpha-1,6-mannosyltransferase ALG12
asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase)
asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog
NP_001034359.2
XP_015127965.1
XP_015128024.1
XP_015128077.1
XP_025003254.1
XP_040542974.1
XP_040543113.1
XP_040543359.1
XP_046763079.1
XP_046763080.1
XP_046763081.1
XP_046763082.1
XP_046763083.1
XP_046763084.1
XP_046763085.1
XP_046763086.1
XP_046763087.1
XP_046790046.1
XP_046790108.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039270.3 → NP_001034359.2  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    19055339..19099213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046934152.1 → XP_046790108.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  2. XM_025147486.3 → XP_025003254.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_015272591.4 → XP_015128077.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_040687179.2 → XP_040543113.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_015272538.4 → XP_015128024.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Related
    ENSGALP00010012247.1, ENSGALT00010021498.1
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  6. XM_015272479.4 → XP_015127965.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Related
    ENSGALP00010012243.1, ENSGALT00010021486.1
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  7. XM_046934090.1 → XP_046790046.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  8. XM_040687425.2 → XP_040543359.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  9. XM_040687040.2 → XP_040542974.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y437, F1P077
    Related
    ENSGALP00010012236.1, ENSGALT00010021475.1
    Conserved Domains (1) summary
    cl21590
    Location:16 → 350
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    19286961..19330803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907131.1 → XP_046763087.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  2. XM_046907129.1 → XP_046763085.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  3. XM_046907124.1 → XP_046763080.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  4. XM_046907130.1 → XP_046763086.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  5. XM_046907125.1 → XP_046763081.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  6. XM_046907123.1 → XP_046763079.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  7. XM_046907127.1 → XP_046763083.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  8. XM_046907126.1 → XP_046763082.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077

  9. XM_046907128.1 → XP_046763084.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    F1P077
Nucleotide Protein Strain
Heading Accession and Version

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