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ABCA9 ATP binding cassette subfamily A member 9 [ Gallus gallus (chicken) ]

Gene ID: 417443, updated on 8-Mar-2024

Summary

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Official Symbol
ABCA9provided by CGNC
Official Full Name
ATP binding cassette subfamily A member 9provided by CGNC
Primary source
CGNC:50508
See related
Ensembl:ENSGALG00010029417
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
40
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (8559320..8581766, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (8153348..8175774, complement)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052244 Neighboring gene FAM20A, golgi associated secretory pathway pseudokinase Neighboring gene ATP binding cassette subfamily A member 8 Neighboring gene ATP binding cassette subfamily A member 5 Neighboring gene mitogen-activated protein kinase kinase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family A member 9
Names
ATP-binding cassette, sub-family A (ABC1), member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    8559320..8581766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040649792.2 → XP_040505726.1  ATP-binding cassette sub-family A member 9

    UniProtKB/TrEMBL
    A0A8V1AK56, A0A8V1AM50
    Conserved Domains (1) summary
    TIGR01257
    Location:236 → 1581
    rim_protein; retinal-specific rim ABC transporter

  2. XM_415694.8 → XP_415694.5  ATP-binding cassette sub-family A member 9

    UniProtKB/TrEMBL
    A0A8V1AK56, A0A8V1AM50
    Related
    ENSGALP00010043851.1, ENSGALT00010071160.1
    Conserved Domains (1) summary
    TIGR01257
    Location:236 → 1581
    rim_protein; retinal-specific rim ABC transporter

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    8153348..8175774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686485.2 → XP_040542419.1  ATP-binding cassette sub-family A member 9

    UniProtKB/TrEMBL
    A0A8V1AK56
    Conserved Domains (1) summary
    TIGR01257
    Location:236 → 1581
    rim_protein; retinal-specific rim ABC transporter
Nucleotide Protein
Heading Accession and Version

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