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SEPTIN9 septin 9 [ Gallus gallus (chicken) ]

Gene ID: 417347, updated on 3-Apr-2024

Summary

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Official Symbol
SEPTIN9provided by CGNC
Official Full Name
septin 9provided by CGNC
Primary source
CGNC:50494
See related
Ensembl:ENSGALG00010029726
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEPT9; septin-9
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (4364018..4459176)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (3967962..4063042)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene CD7 molecule Neighboring gene uncharacterized LOC107054740 Neighboring gene trinucleotide repeat containing 6C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030701.2 → NP_001025872.1  septin-9

    See identical proteins and their annotated locations for NP_001025872.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000316
    UniProtKB/TrEMBL
    A0A8V1ANI9, Q5F3T2
    Conserved Domains (2) summary
    cd01850
    Location:293 → 567
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:275 → 569
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4364018..4459176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015295143.4 → XP_015150629.2  septin-9 isoform X1

  2. XM_040649485.2 → XP_040505419.1  septin-9 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AKB5, A0A8V1ANI9
    Related
    ENSGALP00010044596.1, ENSGALT00010071906.1
    Conserved Domains (2) summary
    cd01850
    Location:314 → 588
    CDC_Septin; CDC/Septin GTPase family
    PRK12323
    Location:157 → 295
    PRK12323; DNA polymerase III subunit gamma/tau

  3. XM_046902015.1 → XP_046757971.1  septin-9 isoform X4

    UniProtKB/TrEMBL
    A0A8V1APY5
    Related
    ENSGALP00010044595.1, ENSGALT00010071905.1

  4. XM_015295144.4 → XP_015150630.1  septin-9 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ALX9, A0A8V1ANI9
    Related
    ENSGALP00010044598.1, ENSGALT00010071908.1
    Conserved Domains (2) summary
    cd01850
    Location:301 → 575
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:283 → 577
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  5. XM_015295146.4 → XP_015150632.1  septin-9 isoform X5

    UniProtKB/TrEMBL
    A0A8V1ANI9
    Conserved Domains (2) summary
    cd01850
    Location:282 → 556
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:264 → 558
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  6. XM_046902020.1 → XP_046757976.1  septin-9 isoform X6

  7. XM_015295148.4 → XP_015150634.1  septin-9 isoform X6

    Conserved Domains (1) summary
    cd01850
    Location:44 → 318
    CDC_Septin; CDC/Septin GTPase family

  8. XM_040649486.2 → XP_040505420.1  septin-9 isoform X6

    Conserved Domains (1) summary
    cd01850
    Location:44 → 318
    CDC_Septin; CDC/Septin GTPase family

  9. XM_046902019.1 → XP_046757975.1  septin-9 isoform X6

  10. XM_046902018.1 → XP_046757974.1  septin-9 isoform X6

  11. XM_046902016.1 → XP_046757972.1  septin-9 isoform X6

  12. XM_040649487.2 → XP_040505421.1  septin-9 isoform X6

    Conserved Domains (1) summary
    cd01850
    Location:44 → 318
    CDC_Septin; CDC/Septin GTPase family

  13. XM_015295147.4 → XP_015150633.1  septin-9 isoform X6

    Conserved Domains (1) summary
    cd01850
    Location:44 → 318
    CDC_Septin; CDC/Septin GTPase family

  14. XM_046902017.1 → XP_046757973.1  septin-9 isoform X6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3967962..4063042
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929350.1 → XP_046785306.1  septin-9 isoform X1

  2. XM_046929351.1 → XP_046785307.1  septin-9 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AKB5

  3. XM_046929353.1 → XP_046785309.1  septin-9 isoform X4

    UniProtKB/TrEMBL
    A0A8V1APY5

  4. XM_046929352.1 → XP_046785308.1  septin-9 isoform X3

    UniProtKB/TrEMBL
    A0A8V1ALX9

  5. XM_046929354.1 → XP_046785310.1  septin-9 isoform X5

  6. XM_046929364.1 → XP_046785320.1  septin-9 isoform X6

  7. XM_046929356.1 → XP_046785312.1  septin-9 isoform X6

  8. XM_046929357.1 → XP_046785313.1  septin-9 isoform X6

  9. XM_046929363.1 → XP_046785319.1  septin-9 isoform X6

  10. XM_046929362.1 → XP_046785318.1  septin-9 isoform X6

  11. XM_046929358.1 → XP_046785314.1  septin-9 isoform X6

  12. XM_046929359.1 → XP_046785315.1  septin-9 isoform X6

  13. XM_046929355.1 → XP_046785311.1  septin-9 isoform X6

  14. XM_046929361.1 → XP_046785317.1  septin-9 isoform X6

Nucleotide Protein Strain
Heading Accession and Version

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