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ANKRD13A ankyrin repeat domain 13A [ Gallus gallus (chicken) ]

Gene ID: 416902, updated on 3-Apr-2024

Summary

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Official Symbol
ANKRD13Aprovided by CGNC
Official Full Name
ankyrin repeat domain 13Aprovided by CGNC
Primary source
CGNC:3862
See related
Ensembl:ENSGALG00010021810
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ANKRD13
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6896299..6908603)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6906819..6919128)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene trichoplein keratin filament binding Neighboring gene GIT ArfGAP 2 Neighboring gene uncharacterized LOC107051594 Neighboring gene sodium-dependent serotonin transporter-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 13A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6896299..6908603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415193.8 → XP_415193.5  ankyrin repeat domain-containing protein 13A isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZMP3
    Related
    ENSGALP00010031964.1, ENSGALT00010053070.1
    Conserved Domains (3) summary
    sd00045
    Location:41 → 72
    ANK; ANK repeat [structural motif]
    pfam11904
    Location:157 → 470
    GPCR_chapero_1; GPCR-chaperone
    pfam12796
    Location:14 → 97
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_025155619.3 → XP_025011387.1  ankyrin repeat domain-containing protein 13A isoform X3

    UniProtKB/TrEMBL
    A0A1D5PWU4, A0A8V0ZMP3
    Related
    ENSGALP00010031959.1, ENSGALT00010053064.1
    Conserved Domains (1) summary
    pfam11904
    Location:68 → 381
    GPCR_chapero_1; GPCR-chaperone

  3. XM_040648535.2 → XP_040504469.1  ankyrin repeat domain-containing protein 13A isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZMP3
    Conserved Domains (3) summary
    sd00045
    Location:41 → 72
    ANK; ANK repeat [structural motif]
    pfam11904
    Location:157 → 470
    GPCR_chapero_1; GPCR-chaperone
    pfam12796
    Location:14 → 97
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_004949927.5 → XP_004949984.1  ankyrin repeat domain-containing protein 13A isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZMP3, A0A8V0ZT30
    Related
    ENSGALP00010031967.1, ENSGALT00010053074.1
    Conserved Domains (4) summary
    cd00204
    Location:17 → 103
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam11904
    Location:161 → 474
    GPCR_chapero_1; GPCR-chaperone
    pfam13637
    Location:46 → 99
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:45 → 76
    ANK; ANK repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6906819..6919128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684715.2 → XP_040540649.1  ankyrin repeat domain-containing protein 13A isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZMP3
    Conserved Domains (2) summary
    sd00045
    Location:41 → 72
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:42 → 95
    Ank_4; Ankyrin repeats (many copies)

  2. XM_046928384.1 → XP_046784340.1  ankyrin repeat domain-containing protein 13A isoform X3

  3. XM_040684718.2 → XP_040540652.1  ankyrin repeat domain-containing protein 13A isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZMP3

  4. XM_040684716.2 → XP_040540650.1  ankyrin repeat domain-containing protein 13A isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZMP3
    Conserved Domains (2) summary
    sd00045
    Location:41 → 72
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:42 → 95
    Ank_4; Ankyrin repeats (many copies)

  5. XM_040684717.2 → XP_040540651.1  ankyrin repeat domain-containing protein 13A isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZMP3
    Conserved Domains (2) summary
    sd00045
    Location:45 → 76
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:46 → 99
    Ank_4; Ankyrin repeats (many copies)
Nucleotide Protein Strain
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