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ANKRD27 ankyrin repeat domain 27 [ Gallus gallus (chicken) ]

Gene ID: 415766, updated on 3-Apr-2024

Summary

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Official Symbol
ANKRD27provided by CGNC
Official Full Name
ankyrin repeat domain 27provided by CGNC
Primary source
CGNC:3461
See related
Ensembl:ENSGALG00010024806
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
34
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (9503824..9545793, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (9848276..9890234, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene dpy-19 like 3 (C. elegans) Neighboring gene neural-cadherin-like Neighboring gene programmed cell death 5 Neighboring gene regulator of G-protein signaling 9 binding protein Neighboring gene nudix hydrolase 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to late endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in tubular endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 27
Names
ankyrin repeat domain 27 (VPS9 domain)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135678.3 → NP_001129150.2  ankyrin repeat domain-containing protein 27

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000248
    UniProtKB/TrEMBL
    A0A8V1A7I5
    Related
    ENSGALP00010037321.1, ENSGALT00010060562.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9503824..9545793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015292432.3 → XP_015147918.2  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Related
    ENSGALP00010037317.1, ENSGALT00010060558.1
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_046899463.1 → XP_046755419.1  ankyrin repeat domain-containing protein 27 isoform X3

    UniProtKB/TrEMBL
    A0A8V1A7I5

  3. XM_015292436.4 → XP_015147922.2  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_015292437.4 → XP_015147923.2  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_015292435.4 → XP_015147921.2  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_046899462.1 → XP_046755418.1  ankyrin repeat domain-containing protein 27 isoform X2

  7. XM_040707066.2 → XP_040563000.1  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Related
    ENSGALP00010037330.1, ENSGALT00010060571.1
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_046899461.1 → XP_046755417.1  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4

  9. XM_040707065.2 → XP_040562999.1  ankyrin repeat domain-containing protein 27 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUV4, A0A8V1A4B7
    Conserved Domains (4) summary
    COG0666
    Location:441 → 603
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:462 → 493
    ANK; ANK repeat [structural motif]
    cl19569
    Location:264 → 363
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
    cl39094
    Location:732 → 867
    Ank_2; Ankyrin repeats (3 copies)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9848276..9890234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925520.1 → XP_046781476.1  ankyrin repeat domain-containing protein 27 isoform X1

  2. XM_046925528.1 → XP_046781484.1  ankyrin repeat domain-containing protein 27 isoform X3

  3. XM_046925523.1 → XP_046781479.1  ankyrin repeat domain-containing protein 27 isoform X1

  4. XM_046925524.1 → XP_046781480.1  ankyrin repeat domain-containing protein 27 isoform X1

  5. XM_046925525.1 → XP_046781481.1  ankyrin repeat domain-containing protein 27 isoform X1

  6. XM_046925527.1 → XP_046781483.1  ankyrin repeat domain-containing protein 27 isoform X2

  7. XM_046925521.1 → XP_046781477.1  ankyrin repeat domain-containing protein 27 isoform X1

  8. XM_046925526.1 → XP_046781482.1  ankyrin repeat domain-containing protein 27 isoform X1

  9. XM_046925522.1 → XP_046781478.1  ankyrin repeat domain-containing protein 27 isoform X1

  10. XM_046925519.1 → XP_046781475.1  ankyrin repeat domain-containing protein 27 isoform X5

  11. XM_046925518.1 → XP_046781474.1  ankyrin repeat domain-containing protein 27 isoform X4

Nucleotide Protein Strain
Heading Accession and Version

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