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acot2.S acyl-CoA thioesterase 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 414573, updated on 11-Apr-2024

Summary

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Official Symbol
acot2.S
Official Full Name
acyl-CoA thioesterase 2 S homeolog
Primary source
Xenbase:XB-GENE-1011318
Locus tag
XELAEV_18041089mg
See related
EnsemblRapid:ENSXLAG00005026314
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
acot2
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Genomic context

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Location:
chromosome: 8S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (5410909..5415560)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (5406843..5411494)

Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene mitotic deacetylase associated SANT domain protein S homeolog Neighboring gene HEAT repeat containing 4 S homeolog Neighboring gene leukocyte receptor tyrosine kinase S homeolog Neighboring gene RNA polymerase II associated protein 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83099

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acyl-CoA thioesterase 2 S homeolog
NP_001084617.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091148.1 → NP_001084617.1  acyl-CoA thioesterase 2 S homeolog

    See identical proteins and their annotated locations for NP_001084617.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068902
    UniProtKB/TrEMBL
    A0A974H560, Q6NTQ4
    Related
    ENSXLAP00005078192.1, ENSXLAT00005079783.1
    Conserved Domains (4) summary
    COG0657
    Location:96 → 396
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam04775
    Location:33 → 153
    Bile_Hydr_Trans; Acyl-CoA thioester hydrolase/BAAT N-terminal region
    pfam08840
    Location:219 → 428
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal
    cl21494
    Location:153 → 274
    Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    5410909..5415560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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