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EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403506, updated on 5-Mar-2024

Summary

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Gene symbol
EEF1A1
Gene description
eukaryotic translation elongation factor 1 alpha 1
See related
Ensembl:ENSCAFG00845012150
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See EEF1A1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (36133628..36138630, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (35447823..35452483, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (35818720..35823375, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (35673037..35677696, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (35694460..35699119, complement)

Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene cyclic GMP-AMP synthase Neighboring gene mitochondrial tRNA translation optimization 1 Neighboring gene translation initiation factor IF-2-like Neighboring gene solute carrier family 17 member 5 Neighboring gene CD109 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001197116.3 → NP_001184045.1  elongation factor 1-alpha 1

    See identical proteins and their annotated locations for NP_001184045.1

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000357
    UniProtKB/TrEMBL
    A0A8C0NJT4, A0A8C0NM63, A0A8C0NPK6, A0A8C0QZH7, A0A8P0SVX5, A0A8P0TMZ0, F2Z4P4
    Related
    ENSCAFP00845016984.1, ENSCAFT00845021614.1
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 460
    PTZ00141; elongation factor 1- alpha; Provisional

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051816.1 Reference ROS_Cfam_1.0

    Range
    36133628..36138630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038682680.1 → XP_038538608.1  elongation factor 1-alpha 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T073
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 344
    PTZ00141; elongation factor 1- alpha; Provisional

  2. XM_038682681.1 → XP_038538609.1  elongation factor 1-alpha 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T073
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 344
    PTZ00141; elongation factor 1- alpha; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049272.1 Alternate UMICH_Zoey_3.1

    Range
    35673037..35677696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

    Range
    35694460..35699119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

    Range
    35818720..35823375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    35447823..35452483 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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