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Atg3 Autophagy-related 3 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40044, updated on 26-Apr-2024

Summary

Official Symbol
Atg3provided by FlyBase
Official Full Name
Autophagy-related 3provided by FlyBase
Primary source
FLYBASE:FBgn0036813
Locus tag
Dmel_CG6877
See related
AllianceGenome:FB:FBgn0036813
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
atg3; ATG3; Aut-1; Aut1; AUT1; CG6877; dAtg3; Dmel\CG6877; Draut1
Summary
Predicted to enable Atg8 ligase activity. Involved in autophagosome assembly; cellular response to starvation; and glycophagy. Located in autophagosome and cytosol. Is expressed in several structures, including embryonic brain; embryonic/larval garland cell; embryonic/larval midgut; extended germ band embryo; and larval ventral nerve cord. Orthologous to human ATG3 (autophagy related 3). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
75D8-75D8; 3-45 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (18748687..18750483)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (18741787..18743583)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mediator complex subunit 11 Neighboring gene nufip Neighboring gene long non-coding RNA:CR45938 Neighboring gene ftz transcription factor 1 Neighboring gene long non-coding RNA:CR45939

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables Atg8-family ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables Atg8-family ligase activity IEA
Inferred from Electronic Annotation
more info
 
enables Atg8-family ligase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ubiquitin-like protein transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in T-tubule organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in autophagosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in autophagosome assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in autophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in autophagy of mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to starvation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glycophagy IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glycophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT involved_in larval midgut cell programmed cell death IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nucleophagy IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in autophagosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in phagophore assembly site IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Autophagy-related 3
Names
Atg3-PA
Aut1
Autophagy-specific gene 3
CG6877-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    18748687..18750483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_140802.3NP_649059.1  Autophagy-related 3 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649059.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VVS6
    Related
    FBpp0074822
    Conserved Domains (3) summary
    pfam03986
    Location:8135
    Autophagy_N; Autophagocytosis associated protein (Atg3), N-terminal domain
    pfam03987
    Location:219280
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain
    pfam10381
    Location:301325
    Autophagy_C; Autophagocytosis associated protein C-terminal