atp5f1a.L ATP synthase F1 subunit alpha L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: atp5f1a.L
Official Full Name: ATP synthase F1 subunit alpha L homeolog
Primary source: Xenbase:XB-GENE-944572
Locus tag: XELAEV_18008489mg
See related: EnsemblRapid:ENSXLAG00005001477
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: mom1; atp5a; atp5a1; atp5f1a; coxpd22; atp5a1.L
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Genomic context

Location:: chromosome: 1L

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (224766521..224775626)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (211590204..211599309)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

New Click chemistry technique reveals substantial mitochondrial ATP synthase sub-unit alpha oxidation before and after fertilization.
Title: Catalyst-free Click PEGylation reveals substantial mitochondrial ATP synthase sub-unit alpha oxidation before and after fertilisation.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ADP binding	IEA Inferred from Electronic Annotation more info
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables proton-transporting ATP synthase activity, rotational mechanism	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within ATP biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proton motive force-driven ATP synthesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within proton transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
part_of mitochondrial proton-transporting ATP synthase, catalytic core	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
part_of proton-transporting ATP synthase complex, catalytic core F(1)	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ATP synthase subunit alpha, mitochondrial

Names: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle L homeolog; An2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087777.1 → NP_001081246.1 ATP synthase subunit alpha, mitochondrial

See identical proteins and their annotated locations for NP_001081246.1

Status: PROVISIONAL

Source sequence(s)

BC080064

UniProtKB/TrEMBL

A0A974I2L5, A0A974I5F3, Q68EY5

Related

ENSXLAP00005004496.1, ENSXLAT00005004562.1

Conserved Domains (4) summary

PRK09281
Location:49 → 553

PRK09281; F0F1 ATP synthase subunit alpha; Validated

cd01132
Location:137 → 418

F1_ATPase_alpha; F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to ...

pfam00306
Location:427 → 518

ATP-synt_ab_C; ATP synthase alpha/beta chain, C terminal domain

pfam02874
Location:69 → 135

ATP-synt_ab_N; ATP synthase alpha/beta family, beta-barrel domain