U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

arf1 ADP ribosylation factor 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 394614, updated on 25-Apr-2024

Summary

Symbol
arf1provided by Xenbase
Full Name
ADP ribosylation factor 1provided by Xenbase
Primary source
Xenbase:XB-GENE-950251
See related
Ensembl:ENSXETG00000013916
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
arf5
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (9921805..9933804, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (2055704..2061855)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene chromosome 6 C1orf35 homolog Neighboring gene mitochondrial ribosomal protein L55 Neighboring gene Wnt family member 3A Neighboring gene wingless-type MMTV integration site family member 9A

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC76046

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ADP-ribosylation factor 1
Names
ADP ribosylation factor 5
NP_989018.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_203687.1NP_989018.1  ADP-ribosylation factor 1

    See identical proteins and their annotated locations for NP_989018.1

    Status: PROVISIONAL

    Source sequence(s)
    BC061435
    UniProtKB/TrEMBL
    A0A803JQL2, F6RJ34, Q6P7Z6
    Related
    ENSXETP00000112212.1, ENSXETT00000117742.1
    Conserved Domains (1) summary
    smart00177
    Location:5179
    ARF; ARF-like small GTPases; ARF, ADP-ribosylation factor

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    9921805..9933804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)