desi1a desumoylating isopeptidase 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: desi1aprovided by ZNC
Official Full Name: desumoylating isopeptidase 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1657
See related: Ensembl:ENSDARG00000033140 AllianceGenome:ZFIN:ZDB-GENE-040426-1657
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: desi2a; pppde2a; fam152ba; zgc:73066
Summary: Predicted to enable hydrolase activity. Predicted to be involved in protein modification by small protein removal. Is expressed in nervous system and trigeminal placode. Orthologous to human DESI1 (desumoylating isopeptidase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 3

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (24973025..24979949, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (24842477..24849401, complement)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables peptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein modification by small protein removal	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: desumoylating isopeptidase 1a

Names: PPPDE peptidase domain containing 2a; desumoylating isopeptidase 2a; family with sequence similarity 152, member Ba

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.