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dnajc24 DnaJ (Hsp40) homolog, subfamily C, member 24 [ Danio rerio (zebrafish) ]

Gene ID: 393424, updated on 27-Mar-2024

Summary

Official Symbol
dnajc24provided by ZNC
Official Full Name
DnaJ (Hsp40) homolog, subfamily C, member 24provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1153
See related
Ensembl:ENSDARG00000023927 AllianceGenome:ZFIN:ZDB-GENE-040426-1153
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
dph4; zgc:63541
Summary
Predicted to enable ATPase activator activity and ferrous iron binding activity. Predicted to be involved in positive regulation of ATPase activity. Orthologous to human DNAJC24 (DnaJ heat shock protein family (Hsp40) member C24). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 25
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (14870054..14899606)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (14773654..14802709)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene neuron navigator 2b Neighboring gene metallophosphoesterase domain containing 2b Neighboring gene uncharacterized LOC101882606 Neighboring gene paired box 6a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC63541, MGC174817

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATPase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 
enables ferrous iron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in positive regulation of ATP-dependent activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
dnaJ homolog subfamily C member 24
Names
DPH4 homolog (JJJ3, S. cerevisiae)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200452.1NP_956746.1  dnaJ homolog subfamily C member 24

    See identical proteins and their annotated locations for NP_956746.1

    Status: PROVISIONAL

    Source sequence(s)
    BC055135
    UniProtKB/TrEMBL
    A0A0R4IBF5, A0A8M1PF79, Q7SY41
    Related
    ENSDARP00000037632.6, ENSDART00000035714.7
    Conserved Domains (2) summary
    pfam00226
    Location:1078
    DnaJ; DnaJ domain
    pfam05207
    Location:94146
    zf-CSL; CSL zinc finger

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    14870054..14899606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021470464.1XP_021326139.1  dnaJ homolog subfamily C member 24 isoform X1

    UniProtKB/TrEMBL
    A0A8M9PMN3
    Conserved Domains (2) summary
    pfam05207
    Location:115167
    zf-CSL; CSL zinc finger
    cl02542
    Location:5699
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395193.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    138679..147979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002457767.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001111213.1: Suppressed sequence

    Description
    NM_001111213.1: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.