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ier5 immediate early response 5 [ Danio rerio (zebrafish) ]

Gene ID: 359827, updated on 27-Mar-2024

Summary

Official Symbol
ier5provided by ZNC
Official Full Name
immediate early response 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-127
See related
Ensembl:ENSDARG00000009881 AllianceGenome:ZFIN:ZDB-GENE-030616-127
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fa99a02; wu:fb04b03; wu:fb11f08; zgc:136422; si:dz129i22.1
Summary
Orthologous to human IER5 (immediate early response 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 22
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (16497670..16499153)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (16471400..16472883)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-121a11.3 Neighboring gene syntaxin 6 Neighboring gene T-cell acute lymphocytic leukemia 1 Neighboring gene PDZK1 interacting protein 1

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC136422, MGC173748

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
immediate early response gene 5 protein
Names
immediately early response

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007197.1NP_001007198.1  immediate early response gene 5 protein

    See identical proteins and their annotated locations for NP_001007198.1

    Status: PROVISIONAL

    Source sequence(s)
    AL592495
    UniProtKB/TrEMBL
    A0A2R8Q3B3, F6NGK8, Q90X37
    Related
    ENSDARP00000004179.5, ENSDART00000014330.7
    Conserved Domains (1) summary
    pfam05760
    Location:1270
    IER; Immediate early response protein (IER)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    16497670..16499153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395100.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    282353..283836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)