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CG7099 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34753, updated on 4-Apr-2024

Summary

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Official Symbol
CG7099provided by FlyBase
Primary source
FLYBASE:FBgn0032517
Locus tag
Dmel_CG7099
See related
AllianceGenome:FB:FBgn0032517
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG7099; dTFIIIC; dTFIIIC220; FBgn 32517
Summary
Predicted to enable DNA binding activity. Predicted to be involved in 5S class rRNA transcription by RNA polymerase III and transcription initiation from RNA polymerase III promoter. Predicted to be part of transcription factor TFIIIC complex. Is expressed in spermatozoon. Orthologous to human GTF3C1 (general transcription factor IIIC subunit 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
34B9-34B10; 2-48 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13387571..13393959)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13387571..13393959)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene loquacious Neighboring gene antisense RNA:CR44599 Neighboring gene Inhibitor of growth family member 5 Neighboring gene Ribosomal protein L24 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of a Drosophila amplicon in follicle cells highlights the diversity of metazoan replication origins. Kim JC, et al. Proc Natl Acad Sci U S A, 2011 Oct 4. PMID 21933960, Free PMC Article
  2. Insulator function and topological domain border strength scale with architectural protein occupancy. Van Bortle K, et al. Genome Biol, 2014 Jun 30. PMID 24981874, Free PMC Article
  3. TAD-free analysis of architectural proteins and insulators. Mourad R, et al. Nucleic Acids Res, 2018 Mar 16. PMID 29272504, Free PMC Article
  4. Some novel intron positions in conserved Drosophila genes are caused by intron sliding or tandem duplication. Lehmann J, et al. BMC Evol Biol, 2010 May 26. PMID 20500887, Free PMC Article
  5. The Wright stuff: reimagining path analysis reveals novel components of the sex determination hierarchy in Drosophila melanogaster. Fear JM, et al. BMC Syst Biol, 2015 Sep 4. PMID 26335107, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 5S class rRNA transcription by RNA polymerase III IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase III promoter IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of transcription factor TFIIIC complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG7099-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    13387571..13393959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135804.3 → NP_609648.1  uncharacterized protein Dmel_CG7099 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609648.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJY7
    Related
    FBpp0080077
    Conserved Domains (1) summary
    pfam04182
    Location:173 → 249
    B-block_TFIIIC; B-block binding subunit of TFIIIC
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q960L1 Q960L1
Q9VJY7 Q9VJY7

Gene LinkOut

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