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lmbrd2b LMBR1 domain containing 2b [ Danio rerio (zebrafish) ]

Gene ID: 335257, updated on 27-Mar-2024

Summary

Official Symbol
lmbrd2bprovided by ZNC
Official Full Name
LMBR1 domain containing 2bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7197
See related
Ensembl:ENSDARG00000017312 AllianceGenome:ZFIN:ZDB-GENE-030131-7197
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fk97a10; zgc:73387; wu:fk97a10
Summary
Predicted to be involved in adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human LMBRD2 (LMBR1 domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 21
Exon count:
18
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (22400962..22422876)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (22364326..22386240)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene lincRNA gene U6 Neighboring gene si:ch73-112l6.1 Neighboring gene calcyphosine-like b Neighboring gene interleukin 7 receptor

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in adrenergic receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in adrenergic receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
G-protein coupled receptor-associated protein LMBRD2B
Names
LMBR1 domain-containing protein 2-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199944.1NP_956238.1  G-protein coupled receptor-associated protein LMBRD2B

    See identical proteins and their annotated locations for NP_956238.1

    Status: PROVISIONAL

    Source sequence(s)
    BC063324
    UniProtKB/Swiss-Prot
    Q6P4P2
    Related
    ENSDARP00000153367.1, ENSDART00000183455.1
    Conserved Domains (1) summary
    pfam04791
    Location:1555
    LMBR1; LMBR1-like membrane protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    22400962..22422876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)