xpo6 exportin 6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: xpo6provided by ZNC
Official Full Name: exportin 6provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-5912
See related: Ensembl:ENSDARG00000041217 AllianceGenome:ZFIN:ZDB-GENE-030131-5912
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: Ranbp20; fi24f12; wu:fi24f12
Summary: Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in cytoplasm and nucleus. Orthologous to human XPO6 (exportin 6). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (15085294..15131436, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (14935494..14981636, complement)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AW154268 (e-PCR)
- UniSTS:205915

fc33e07.x1 (e-PCR)
- UniSTS:188011

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables nuclear export signal receptor activity	IEA Inferred from Electronic Annotation more info
enables small GTPase binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular protein transport	IEA Inferred from Electronic Annotation more info
involved_in protein export from nucleus	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein export from nucleus	IEA Inferred from Electronic Annotation more info
involved_in protein export from nucleus	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: exportin-6

Names: exp6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.