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Lhfpl7 LHFPL tetraspan subfamily member 7 [ Mus musculus (house mouse) ]

Gene ID: 333048, updated on 12-May-2024

Summary

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Official Symbol
Lhfpl7provided by MGI
Official Full Name
LHFPL tetraspan subfamily member 7provided by MGI
Primary source
MGI:MGI:2685700
See related
Ensembl:ENSMUSG00000066964 AllianceGenome:MGI:2685700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm854; Tmem211
Summary
Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human TMEM211 (transmembrane protein 211). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
human all
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Genomic context

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See Lhfpl7 in Genome Data Viewer
Location:
5 F; 5 55.43 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (113374775..113388089)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (113226909..113240223)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2900026A02 gene Neighboring gene RIKEN cDNA 4833439F03 gene Neighboring gene VISTA enhancer mm329 Neighboring gene predicted gene, 42161 Neighboring gene small G protein signaling modulator 1 Neighboring gene microRNA 7229

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Chemically induced (ENU) (1) 
  • Endonuclease-mediated (2) 
  • Targeted (2) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
LHFPL tetraspan subfamily member 7 protein
Names
transmembrane protein 211

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033428.2 → NP_001028600.1  LHFPL tetraspan subfamily member 7 protein precursor

    See identical proteins and their annotated locations for NP_001028600.1

    Status: PROVISIONAL

    Source sequence(s)
    AK138629
    Consensus CDS
    CCDS19548.1
    UniProtKB/Swiss-Prot
    B9EJN6, Q3UUA0
    UniProtKB/TrEMBL
    B7ZWI1
    Related
    ENSMUSP00000083808.3, ENSMUST00000086615.3
    Conserved Domains (1) summary
    cl21598
    Location:19 → 166
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    113374775..113388089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006535021.3 → XP_006535084.1  LHFPL tetraspan subfamily member 7 protein isoform X1

    See identical proteins and their annotated locations for XP_006535084.1

    UniProtKB/Swiss-Prot
    B9EJN6, Q3UUA0
    UniProtKB/TrEMBL
    B7ZWI1
    Conserved Domains (1) summary
    cl21598
    Location:19 → 166
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3UUA0.1 GenPept UniProtKB/Swiss-Prot:Q3UUA0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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