mkln1 muskelin 1, intracellular mediator containing kelch motifs [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mkln1provided by ZNC
Official Full Name: muskelin 1, intracellular mediator containing kelch motifsprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3942
See related: Ensembl:ENSDARG00000025576 AllianceGenome:ZFIN:ZDB-GENE-030131-3942
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc60a07; wu:fc60a07
Summary: Predicted to be active in cytoplasm. Orthologous to human MKLN1 (muskelin 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (11695982..11730753)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (11697133..11731904)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc60a07 (e-PCR)
- UniSTS:189454

G47193 (e-PCR)
- UniSTS:107980

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: muskelin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212694.1 → NP_997859.1 muskelin

See identical proteins and their annotated locations for NP_997859.1

Status: PROVISIONAL

Source sequence(s)

AF418017

UniProtKB/TrEMBL

B2GSV0, Q8AYJ5

Related

ENSDARP00000113321.2, ENSDART00000137736.4

Conserved Domains (5) summary

PLN02153
Location:301 → 495

PLN02153; epithiospecifier protein

sd00038
Location:265 → 316

Kelch; KELCH repeat [structural motif]

pfam01344
Location:450 → 494

Kelch_1; Kelch motif

pfam06588
Location:6 → 201

Muskelin_N; Muskelin N-terminus

pfam13415
Location:276 → 328

Kelch_3; Galactose oxidase, central domain