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C730027H18Rik RIKEN cDNA C730027H18 gene [ Mus musculus (house mouse) ]

Gene ID: 319572, updated on 8-Feb-2024

Summary

Official Symbol
C730027H18Rikprovided by MGI
Official Full Name
RIKEN cDNA C730027H18 geneprovided by MGI
Primary source
MGI:MGI:2442303
See related
Ensembl:ENSMUSG00000112366 AllianceGenome:MGI:2442303
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in kidney adult (RPKM 3.4) and liver adult (RPKM 1.9) See more
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Genomic context

See C730027H18Rik in Genome Data Viewer
Location:
10 B5.3; 10 36.81 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (71004567..71017870, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (71168737..71182040, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene BicC family RNA binding protein 1 Neighboring gene U6 snRNA-associated Sm-like protein LSm7 pseudogene Neighboring gene thioredoxin-like 4B pseudogene Neighboring gene RIKEN cDNA 1700113B09 gene Neighboring gene predicted gene, 34328 Neighboring gene STARR-positive B cell enhancer ABC_E2942 Neighboring gene transcription factor A, mitochondrial

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038040.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079680
    Related
    ENSMUST00000218381.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    71004567..71017870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)