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GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 [ Homo sapiens (human) ]

Gene ID: 2982, updated on 11-Apr-2024

Summary

Official Symbol
GUCY1A1provided by HGNC
Official Full Name
guanylate cyclase 1 soluble subunit alpha 1provided by HGNC
Primary source
HGNC:HGNC:4685
See related
Ensembl:ENSG00000164116 MIM:139396; AllianceGenome:HGNC:4685
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GUCA3; MYMY6; GC-SA3; GUC1A3; GUCSA3; GUCY1A3; GCS-alpha-3; GC-S-alpha-1
Summary
Soluble guanylate cyclases are heterodimeric proteins that catalyze the conversion of GTP to 3',5'-cyclic GMP and pyrophosphate. The protein encoded by this gene is an alpha subunit of this complex and it interacts with a beta subunit to form the guanylate cyclase enzyme, which is activated by nitric oxide. Several transcript variants encoding a few different isoforms have been found for this gene. [provided by RefSeq, Jan 2012]
Expression
Ubiquitous expression in prostate (RPKM 11.3), heart (RPKM 8.5) and 24 other tissues See more
Orthologs
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Genomic context

See GUCY1A1 in Genome Data Viewer
Location:
4q32.1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (155666848..155737059)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (158999647..159069856)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (156588000..156658211)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377505 Neighboring gene uncharacterized LOC105377504 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:156473069-156473570 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:156473571-156474070 Neighboring gene Sharpr-MPRA regulatory region 7198 Neighboring gene uncharacterized LOC105377506 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15769 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15770 Neighboring gene guanylate cyclase 1 soluble subunit beta 1 Neighboring gene uncharacterized LOC105377507 Neighboring gene acid sensing ion channel subunit family member 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Moyamoya disease with early-onset achalasia
MedGen: C3810403 OMIM: 615750 GeneReviews: Not available
Compare labs

EBI GWAS Catalog

Description
Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk.
EBI GWAS Catalog
Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure.
EBI GWAS Catalog
Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension.
EBI GWAS Catalog
Genome-wide association study in Han Chinese identifies four new susceptibility loci for coronary artery disease.
EBI GWAS Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Tat tat HIV-1 Tat potentiates NMDA-evoked (Ca2+)I responses involve LRP and a Src family kinase via the NOS/sGC/PKG pathway PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables guanylate cyclase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables guanylate cyclase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor activity TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in GABA-ergic synapse IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 
part_of guanylate cyclase complex, soluble IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of guanylate cyclase complex, soluble IDA
Inferred from Direct Assay
more info
PubMed 
part_of guanylate cyclase complex, soluble IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
guanylate cyclase soluble subunit alpha-1
Names
guanylate cyclase 1, soluble, alpha 3
soluble guanylate cyclase large subunit
NP_000847.2
NP_001124154.1
NP_001124155.1
NP_001124156.1
NP_001124157.1
NP_001124159.1
NP_001243378.1
NP_001366595.1
NP_001366596.1
NP_001366597.1
NP_001366598.1
NP_001366599.1
NP_001366600.1
NP_001366601.1
NP_001366602.1
NP_001366603.1
NP_001366604.1
NP_001366605.1
XP_005263013.1
XP_005263014.1
XP_047306099.1
XP_047306100.1
XP_047306102.1
XP_047306103.1
XP_047306104.1
XP_054205815.1
XP_054205816.1
XP_054205817.1
XP_054205818.1
XP_054205819.1
XP_054205820.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_034128.1 RefSeqGene

    Range
    5139..75350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_000856.6NP_000847.2  guanylate cyclase soluble subunit alpha-1 isoform A

    See identical proteins and their annotated locations for NP_000847.2

    Status: REVIEWED

    Source sequence(s)
    AC104083, CD671731, Y15723
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000421493.1, ENST00000511108.5
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  2. NM_001130682.3NP_001124154.1  guanylate cyclase soluble subunit alpha-1 isoform A

    See identical proteins and their annotated locations for NP_001124154.1

    Status: REVIEWED

    Source sequence(s)
    AC104083, CD671731, DA793192, Y15723
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000424361.1, ENST00000506455.6
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  3. NM_001130683.4NP_001124155.1  guanylate cyclase soluble subunit alpha-1 isoform A

    See identical proteins and their annotated locations for NP_001124155.1

    Status: REVIEWED

    Source sequence(s)
    AC104083, AK226125, BX649180, CD671731, DA518091
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000296518.7, ENST00000296518.11
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  4. NM_001130684.3NP_001124156.1  guanylate cyclase soluble subunit alpha-1 isoform A

    See identical proteins and their annotated locations for NP_001124156.1

    Status: REVIEWED

    Source sequence(s)
    AC104083, CD671731, Y15723
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000426040.1, ENST00000513574.1
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  5. NM_001130685.3NP_001124157.1  guanylate cyclase soluble subunit alpha-1 isoform B

    See identical proteins and their annotated locations for NP_001124157.1

    Status: REVIEWED

    Source sequence(s)
    AC104083, AK226125, CD671731, DA518091
    UniProtKB/TrEMBL
    J3KPQ8
    Related
    ENSP00000377418.3, ENST00000393832.7
    Conserved Domains (4) summary
    smart00044
    Location:210399
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:237408
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:42231
    HNOBA; Heme NO binding associated
    cl01153
    Location:395441
    NapB; Nitrate reductase cytochrome c-type subunit (NapB)
  6. NM_001130687.3NP_001124159.1  guanylate cyclase soluble subunit alpha-1 isoform D

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS54812.1
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000426968.1, ENST00000511507.5
    Conserved Domains (4) summary
    smart00044
    Location:445624
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:472624
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07700
    Location:126235
    HNOB; Haem-NO-binding
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  7. NM_001256449.2NP_001243378.1  guanylate cyclase soluble subunit alpha-1 isoform A

    See identical proteins and their annotated locations for NP_001243378.1

    Status: REVIEWED

    Source sequence(s)
    AC104083, AK096588, CD671731, Y15723
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Related
    ENSP00000412201.2, ENST00000455639.6
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  8. NM_001379666.1NP_001366595.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  9. NM_001379667.1NP_001366596.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  10. NM_001379668.1NP_001366597.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  11. NM_001379669.1NP_001366598.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  12. NM_001379670.1NP_001366599.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  13. NM_001379671.1NP_001366600.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  14. NM_001379672.1NP_001366601.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  15. NM_001379673.1NP_001366602.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  16. NM_001379674.1NP_001366603.1  guanylate cyclase soluble subunit alpha-1 isoform A

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Consensus CDS
    CCDS34085.1
    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    pfam00211
    Location:472643
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  17. NM_001379675.1NP_001366604.1  guanylate cyclase soluble subunit alpha-1 isoform E

    Status: REVIEWED

    Source sequence(s)
    AC104083
    UniProtKB/TrEMBL
    B3KU69
    Conserved Domains (2) summary
    smart00044
    Location:445573
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam07701
    Location:277466
    HNOBA; Heme NO binding associated
  18. NM_001379676.1NP_001366605.1  guanylate cyclase soluble subunit alpha-1 isoform F

    Status: REVIEWED

    Source sequence(s)
    AC104083
    Conserved Domains (2) summary
    pfam00211
    Location:303474
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:126297
    HNOBA; Heme NO binding associated

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    155666848..155737059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005262957.4XP_005263014.1  guanylate cyclase soluble subunit alpha-1 isoform X3

    See identical proteins and their annotated locations for XP_005263014.1

    UniProtKB/TrEMBL
    J3KPQ8
    Conserved Domains (4) summary
    smart00044
    Location:210399
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:237408
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:42231
    HNOBA; Heme NO binding associated
    cl01153
    Location:395441
    NapB; Nitrate reductase cytochrome c-type subunit (NapB)
  2. XM_047450144.1XP_047306100.1  guanylate cyclase soluble subunit alpha-1 isoform X1

    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
  3. XM_005262956.4XP_005263013.1  guanylate cyclase soluble subunit alpha-1 isoform X3

    See identical proteins and their annotated locations for XP_005263013.1

    UniProtKB/TrEMBL
    J3KPQ8
    Conserved Domains (4) summary
    smart00044
    Location:210399
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
    pfam00211
    Location:237408
    Guanylate_cyc; Adenylate and Guanylate cyclase catalytic domain
    pfam07701
    Location:42231
    HNOBA; Heme NO binding associated
    cl01153
    Location:395441
    NapB; Nitrate reductase cytochrome c-type subunit (NapB)
  4. XM_047450148.1XP_047306104.1  guanylate cyclase soluble subunit alpha-1 isoform X3

  5. XM_047450143.1XP_047306099.1  guanylate cyclase soluble subunit alpha-1 isoform X1

    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
  6. XM_047450146.1XP_047306102.1  guanylate cyclase soluble subunit alpha-1 isoform X1

    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
  7. XM_047450147.1XP_047306103.1  guanylate cyclase soluble subunit alpha-1 isoform X2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    158999647..159069856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054349844.1XP_054205819.1  guanylate cyclase soluble subunit alpha-1 isoform X3

  2. XM_054349840.1XP_054205815.1  guanylate cyclase soluble subunit alpha-1 isoform X1

    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
  3. XM_054349843.1XP_054205818.1  guanylate cyclase soluble subunit alpha-1 isoform X3

  4. XM_054349845.1XP_054205820.1  guanylate cyclase soluble subunit alpha-1 isoform X3

  5. XM_054349841.1XP_054205816.1  guanylate cyclase soluble subunit alpha-1 isoform X1

    UniProtKB/Swiss-Prot
    D3DP19, D6RDW3, O43843, Q02108, Q8TAH3
  6. XM_054349842.1XP_054205817.1  guanylate cyclase soluble subunit alpha-1 isoform X2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001130686.1: Suppressed sequence

    Description
    NM_001130686.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.