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Nt5e 5' nucleotidase, ecto [ Mus musculus (house mouse) ]

Gene ID: 23959, updated on 14-May-2024

Summary

Official Symbol
Nt5eprovided by MGI
Official Full Name
5' nucleotidase, ectoprovided by MGI
Primary source
MGI:MGI:99782
See related
Ensembl:ENSMUSG00000032420 AllianceGenome:MGI:99782
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NT; Nt5; eNT; CD73; 5'-NT; 2210401F01Rik
Summary
This gene encodes a membrane-bound nucleotidase that hydrolyzes extracellular nucleoside monophosphates. The encoded preproprotein undergoes proteolytic processing to generate to a functional, homodimeric enzyme that preferentially uses adenosine monophosphate as a substrate to generate free adenosine. Mice lacking the encoded protein exhibit a significantly reduced fall in stop flow pressure and superficial nephron glomerular filtration rate in response to a saturating increase of tubular perfusion flow. [provided by RefSeq, Sep 2016]
Expression
Broad expression in bladder adult (RPKM 18.6), lung adult (RPKM 11.8) and 21 other tissues See more
Orthologs
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Genomic context

Location:
9 E3.1; 9 47.24 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (88209662..88254142)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (88327609..88372089)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 25, member 40 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E8304 Neighboring gene STARR-seq mESC enhancer starr_24855 Neighboring gene microRNA 12205 Neighboring gene sorting nexin 14 Neighboring gene STARR-positive B cell enhancer ABC_E10573 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene STARR-seq mESC enhancer starr_24856 Neighboring gene synaptotagmin binding, cytoplasmic RNA interacting protein Neighboring gene STARR-positive B cell enhancer ABC_E9772

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (8) 
  • Targeted (6)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 5'-deoxynucleotidase activity ISO
Inferred from Sequence Orthology
more info
 
enables 5'-nucleotidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables 5'-nucleotidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables 5'-nucleotidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables 5'-nucleotidase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables GMP 5'-nucleotidase activity ISO
Inferred from Sequence Orthology
more info
 
enables IMP 5'-nucleotidase activity ISO
Inferred from Sequence Orthology
more info
 
enables XMP 5'-nucleosidase activity IEA
Inferred from Electronic Annotation
more info
 
enables ferrous iron binding ISO
Inferred from Sequence Orthology
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables thymidylate 5'-phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in ADP catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in AMP catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within AMP catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in AMP catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in AMP catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in ATP metabolic process ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within adenosine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in adenosine biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in adenosine metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in calcium ion homeostasis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in inhibition of non-skeletal tissue mineralization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in inhibition of non-skeletal tissue mineralization ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in leukocyte cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of inflammatory response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in response to ATP ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in response to inorganic substance ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in synaptic membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
5'-nucleotidase
Names
5'-deoxynucleotidase
IMP-specific 5'-nucleotidase
ecto-5'-nucleotidase
thymidylate 5'-phosphatase
NP_035981.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011851.4NP_035981.1  5'-nucleotidase preproprotein

    See identical proteins and their annotated locations for NP_035981.1

    Status: REVIEWED

    Source sequence(s)
    AK029979, BB850214
    Consensus CDS
    CCDS23386.1
    UniProtKB/Swiss-Prot
    Q3U3S1, Q61503
    UniProtKB/TrEMBL
    Q0VEE0
    Related
    ENSMUSP00000034992.7, ENSMUST00000034992.8
    Conserved Domains (3) summary
    COG0737
    Location:21534
    UshA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family [Nucleotide transport and metabolism, Defense mechanisms]
    cd07409
    Location:31312
    MPP_CD73_N; CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain
    pfam02872
    Location:354509
    5_nucleotid_C; 5'-nucleotidase, C-terminal domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    88209662..88254142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)