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Tacr3 tachykinin receptor 3 [ Mus musculus (house mouse) ]

Gene ID: 21338, updated on 11-Apr-2024

Summary

Official Symbol
Tacr3provided by MGI
Official Full Name
tachykinin receptor 3provided by MGI
Primary source
MGI:MGI:892968
See related
Ensembl:ENSMUSG00000028172 AllianceGenome:MGI:892968
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nkr; Nk3r; Tac3r
Summary
This gene belongs to a family of genes that function as receptors for tachykinins. The receptors belonging to this family are characterized by interactions with G proteins and 7 hydrophobic transmembrane regions. This gene encodes the receptor for the tachykinin neurokinin 3, also referred to as neurokinin B. [provided by RefSeq, Mar 2010]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Tacr3 in Genome Data Viewer
Location:
3 G3; 3 62.47 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (134534768..134640342)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (134829007..134934581)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930539C22 gene Neighboring gene peptidylprolyl isomerase A pseudogene 3_1390.1 Neighboring gene STARR-seq mESC enhancer starr_09046 Neighboring gene STARR-seq mESC enhancer starr_09047 Neighboring gene STARR-seq mESC enhancer starr_09049 Neighboring gene STARR-seq mESC enhancer starr_09050 Neighboring gene adaptor-related protein complex AP-1, sigma 3 pseudogene Neighboring gene DCN1, defective in cullin neddylation 1, domain containing 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (6)  1 citation
  • Endonuclease-mediated (4) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables tachykinin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables tachykinin receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in dendrite membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in neuronal cell body membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in sperm midpiece IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in sperm midpiece ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
neuromedin-K receptor
Names
NK-3 receptor
Nk3 receptor
neurokinin 3 receptor
neurokinin B receptor
neuromedin K receptor
NP_067357.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021382.6NP_067357.1  neuromedin-K receptor

    See identical proteins and their annotated locations for NP_067357.1

    Status: REVIEWED

    Source sequence(s)
    AC101889, AK031898, AV336806
    Consensus CDS
    CCDS17852.1
    UniProtKB/Swiss-Prot
    P47937, Q61968, Q8BL44, Q9JKN0
    UniProtKB/TrEMBL
    Q6NXX1
    Related
    ENSMUSP00000029822.5, ENSMUST00000029822.6
    Conserved Domains (2) summary
    pfam00001
    Location:89343
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:81204
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    134534768..134640342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)