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Slc34a2 solute carrier family 34 (sodium phosphate), member 2 [ Mus musculus (house mouse) ]

Gene ID: 20531, updated on 21-Apr-2024

Summary

Official Symbol
Slc34a2provided by MGI
Official Full Name
solute carrier family 34 (sodium phosphate), member 2provided by MGI
Primary source
MGI:MGI:1342284
See related
Ensembl:ENSMUSG00000029188 AllianceGenome:MGI:1342284
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Npt2b; NaPi-2b; D5Ertd227e
Summary
Enables sodium:phosphate symporter activity. Acts upstream of or within in utero embryonic development and phosphate ion transport. Located in apical plasma membrane and brush border. Is expressed in several structures, including egg cylinder; genitourinary system; small intestine; and tooth. Human ortholog(s) of this gene implicated in pulmonary alveolar microlithiasis. Orthologous to human SLC34A2 (solute carrier family 34 member 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in lung adult (RPKM 498.2), large intestine adult (RPKM 142.1) and 1 other tissue See more
Orthologs
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Genomic context

Location:
5 C1; 5 28.92 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (53206695..53229006)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (53049353..53071664)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 5033403H07 gene Neighboring gene predicted gene, 23532 Neighboring gene predicted gene, 30301 Neighboring gene STARR-seq mESC enhancer starr_13073 Neighboring gene predicted gene 17182 Neighboring gene sel-1 suppressor of lin-12-like 3 (C. elegans) Neighboring gene STARR-seq mESC enhancer starr_13074 Neighboring gene predicted gene, 54298 Neighboring gene predicted gene, 30464

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (5)  1 citation
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables phosphate ion binding ISO
Inferred from Sequence Orthology
more info
 
enables protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
enables sodium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables sodium:phosphate symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sodium:phosphate symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sodium:phosphate symporter activity ISO
Inferred from Sequence Orthology
more info
 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in apical plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in brush border IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in brush border IDA
Inferred from Direct Assay
more info
PubMed 
located_in brush border membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in microvillus membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
sodium-dependent phosphate transport protein 2B
Names
Na(+)-dependent phosphate cotransporter 2B
Na(+)/Pi cotransporter 2B
sodium-phosphate transport protein 2B
sodium/phosphate cotransporter 2B
solute carrier family 34 member 2
type IIb Na/Picotransporter

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011402.3NP_035532.2  sodium-dependent phosphate transport protein 2B

    See identical proteins and their annotated locations for NP_035532.2

    Status: VALIDATED

    Source sequence(s)
    AK004832, AK145599, BB873139, CJ097638, CJ205572
    Consensus CDS
    CCDS19291.1
    UniProtKB/Swiss-Prot
    Q9DBP0, Q9Z290
    Related
    ENSMUSP00000092380.5, ENSMUST00000094787.8
    Conserved Domains (2) summary
    TIGR01013
    Location:105604
    2a58; Phosphate:Na+ Symporter (PNaS) Family
    pfam02690
    Location:110201
    Na_Pi_cotrans; Na+/Pi-cotransporter

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    53206695..53229006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)