U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ABC1 putative ABC transporter [ Aureococcus anophagefferens ]

Gene ID: 20220241, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
ABC1
Gene description
putative ABC transporter
Locus tag
AURANDRAFT_26658
Gene type
protein coding
RNA name
putative ABC transporter
RefSeq status
PROVISIONAL
Organism
Aureococcus anophagefferens (strain: CCMP1984)
Lineage
Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Unknown
Exon count:
2

NW_008705570.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008705570.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Gobler CJ, et al. Proc Natl Acad Sci U S A, 2011 Mar 15. PMID 21368207, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
putative ABC transporter
XP_009037428.1
  • General ATP-binding cassette transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008705570.1 Reference assembly

    Range
    571523..573344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009039180.1 → XP_009037428.1  putative ABC transporter [Aureococcus anophagefferens]

    See identical proteins and their annotated locations for XP_009037428.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0YA38
    Conserved Domains (3) summary
    TIGR00955
    Location:37 → 581
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
    pfam01061
    Location:322 → 526
    ABC2_membrane; ABC-2 type transporter
    cl21455
    Location:26 → 254
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases