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Prl4a1 prolactin family 4, subfamily a, member 1 [ Mus musculus (house mouse) ]

Gene ID: 19110, updated on 11-Apr-2024

Summary

Official Symbol
Prl4a1provided by MGI
Official Full Name
prolactin family 4, subfamily a, member 1provided by MGI
Primary source
MGI:MGI:1206587
See related
Ensembl:ENSMUSG00000005891 AllianceGenome:MGI:1206587
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ghd23; PLP-A; Prlpa
Summary
Predicted to enable hormone activity and prolactin receptor binding activity. Acts upstream of or within response to hypoxia. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in decidua; ectoplacental cone; extraembryonic component; and placenta. Human ortholog(s) of this gene implicated in carotid artery disease. Orthologous to human PRL (prolactin). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward placenta adult (RPKM 133.5) See more
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Genomic context

See Prl4a1 in Genome Data Viewer
Location:
13 A3.1; 13 12.66 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (28200195..28207531)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (28016212..28023548)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34019 Neighboring gene STARR-seq mESC enhancer starr_34020 Neighboring gene STARR-seq mESC enhancer starr_34021 Neighboring gene dynein, axonemal, heavy chain 9 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34022 Neighboring gene lysophosphatidylcholine acyltransferase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_34023 Neighboring gene STARR-seq mESC enhancer starr_34024 Neighboring gene STARR-seq mESC enhancer starr_34025 Neighboring gene prolactin family 5, subfamily a, member 1 Neighboring gene STARR-seq mESC enhancer starr_34026 Neighboring gene ribosomal protein S18, pseudogene 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables prolactin receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables prolactin receptor binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in female pregnancy IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mammary gland development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of lactation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of receptor signaling pathway via JAK-STAT IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within response to hypoxia IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to nutrient levels IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
prolactin-4A1
Names
PRL-like protein A
growth hormone d23
placental prolactin-like protein A
prolactin-like protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011165.4NP_035295.1  prolactin-4A1 precursor

    See identical proteins and their annotated locations for NP_035295.1

    Status: VALIDATED

    Source sequence(s)
    AK141285, BC052218
    Consensus CDS
    CCDS26409.1
    UniProtKB/Swiss-Prot
    O35256
    UniProtKB/TrEMBL
    A0A0M6L0M4
    Related
    ENSMUSP00000021779.7, ENSMUST00000021779.8
    Conserved Domains (1) summary
    cd10288
    Location:37227
    prolactin_like; Prolactin (PRL or PRL1), chorionic somatomammotropin, and related pituitary gland hormones

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    28200195..28207531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)