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Cuzd1 CUB and zona pellucida-like domains 1 [ Mus musculus (house mouse) ]

Gene ID: 16433, updated on 25-Apr-2024

Summary

Official Symbol
Cuzd1provided by MGI
Official Full Name
CUB and zona pellucida-like domains 1provided by MGI
Primary source
MGI:MGI:1202881
See related
Ensembl:ENSMUSG00000040205 AllianceGenome:MGI:1202881
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Usg; Erg-1; Uo-44; Utczp; Itmap1
Summary
Involved in trypsinogen activation. Located in zymogen granule membrane. Orthologous to human CUZD1 (CUB and zona pellucida like domains 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward genital fat pad adult (RPKM 834.5) See more
Orthologs
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Genomic context

Location:
7 F3; 7 73.81 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (130910283..130924021, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (131308554..131322292, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700029B22 gene Neighboring gene CUB domain containing protein 3 Neighboring gene deleted in malignant brain tumors 1 pseudogene Neighboring gene family with sequence similarity 24 member B Neighboring gene family with sequence similarity 24, member A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (2) 

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within cell adhesion IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in female pregnancy NAS
Non-traceable Author Statement
more info
PubMed 
involved_in hormone-mediated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in trypsinogen activation IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cell surface IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane NAS
Non-traceable Author Statement
more info
PubMed 
located_in zymogen granule IDA
Inferred from Direct Assay
more info
PubMed 
located_in zymogen granule membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
CUB and zona pellucida-like domain-containing protein 1
Names
CUB and ZP domain-containing protein 1
integral membrane-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008411.3NP_032437.3  CUB and zona pellucida-like domain-containing protein 1 precursor

    See identical proteins and their annotated locations for NP_032437.3

    Status: VALIDATED

    Source sequence(s)
    AC110885, AC156606, BY707834, BY707920
    Consensus CDS
    CCDS40157.1
    UniProtKB/Swiss-Prot
    B2RU69, P70412, Q9CTZ7
    Related
    ENSMUSP00000037168.8, ENSMUST00000046611.9
    Conserved Domains (4) summary
    smart00042
    Location:55143
    CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein
    smart00241
    Location:277519
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:400517
    Zona_pellucida; Zona pellucida-like domain
    pfam00431
    Location:154262
    CUB; CUB domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    130910283..130924021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)