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F394_gp04 putative lysozyme [ Aeromonas phage vB_AsaM-56 ]

Gene ID: 14013180, updated on 8-Jan-2023

Summary

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Gene symbol
F394_gp04
Gene description
putative lysozyme
Locus tag
F394_gp04
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aeromonas phage vB_AsaM-56 (isolate: HER109, nat-host: Aeromonas salmonicida, synonym: phage 56-Popoff)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Popoffvirus; Popoffvirus pv56
Old locus tag
AsaM-56_0004
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Genomic context

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Sequence:
NC_019527.1 (689..1225, complement)

NC_019527.1Genomic Context describing neighboring genes Neighboring gene Rz-like spanin Neighboring gene Rz-like spanin Neighboring gene holin Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_019527.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phage morphology recapitulates phylogeny: the comparative genomics of a new group of myoviruses. Comeau AM, et al. PLoS One, 2012. PMID 22792219, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative lysozyme
YP_007007693.1
  • gp04

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019527.1 Reference assembly

    Range
    689..1225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_007007693.1 putative lysozyme [Aeromonas phage vB_AsaM-56]

    See identical proteins and their annotated locations for YP_007007693.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A219YB96, A0A219YBD9, H9C0Q4
    Conserved Domains (1) summary
    cl00222
    Location:14 → 145
    lysozyme_like; lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. ...
Nucleotide Protein
Heading Accession and Version

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