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alkbh4 alkB homolog 4, lysine demthylase [ Anguilla rostrata (American eel) ]

Gene ID: 135263873, updated on 11-Apr-2024

Summary

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Gene symbol
alkbh4
Gene description
alkB homolog 4, lysine demthylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla rostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current ASM1855537v3 (GCF_018555375.3) 9 NC_057941.1 (44354498..44356422)

Chromosome 9 - NC_057941.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135263889 Neighboring gene neutrophil cytosolic factor 1 Neighboring gene RNA polymerase II subunit J Neighboring gene leucine-rich repeats and WD repeat domain containing 1 Neighboring gene branched chain ketoacid dehydrogenase kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057941.1 Chromosome 9 Reference ASM1855537v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in contractile ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase alkB homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_018555375.3-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1855537v3

Genomic

  1. NC_057941.1 Reference ASM1855537v3

    Range
    44354498..44356422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064352329.1 → XP_064208399.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4

Nucleotide Protein
Heading Accession and Version

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