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arfip1 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [ Anguilla rostrata (American eel) ]

Gene ID: 135254798, updated on 11-Apr-2024

Summary

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Gene symbol
arfip1
Gene description
ADP-ribosylation factor interacting protein 1 (arfaptin 1)
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla rostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current ASM1855537v3 (GCF_018555375.3) 5 NC_057937.1 (15001293..15030562, complement)

Chromosome 5 - NC_057937.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 2a Neighboring gene FH2 domain-containing protein 1-like Neighboring gene uncharacterized LOC135254799 Neighboring gene transmembrane protein 154 Neighboring gene cilia- and flagella-associated protein 251-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057937.1 Chromosome 5 Reference ASM1855537v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein domain specific binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arfaptin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_018555375.3-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1855537v3

Genomic

  1. NC_057937.1 Reference ASM1855537v3

    Range
    15001293..15030562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064335310.1 → XP_064191380.1  arfaptin-1 isoform X1

  2. XM_064335312.1 → XP_064191382.1  arfaptin-1 isoform X3

  3. XM_064335311.1 → XP_064191381.1  arfaptin-1 isoform X2

Nucleotide Protein
Heading Accession and Version

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