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afg3l1 AFG3-like AAA ATPase 1 [ Sardina pilchardus (sardine) ]

Gene ID: 134093698, updated on 29-Mar-2024

Summary

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Gene symbol
afg3l1
Gene description
AFG3-like AAA ATPase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sardina pilchardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Sardina
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_01 current fSarPil1.1 (GCF_963854185.1) 10 NC_085003.1 (20360875..20371785, complement)

Chromosome 10 - NC_085003.1Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T cells 5a Neighboring gene dysbindin domain containing 1 Neighboring gene pannexin 2 Neighboring gene modulator of VRAC current 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085003.1 Chromosome 10 Reference fSarPil1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of m-AAA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AFG3-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963854185.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSarPil1.1

Genomic

  1. NC_085003.1 Reference fSarPil1.1

    Range
    20360875..20371785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062546895.1 → XP_062402879.1  AFG3-like protein 2

Nucleotide Protein
Heading Accession and Version

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