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ATG4C autophagy related 4C cysteine peptidase [ Neopsephotus bourkii (Bourke's parrot) ]

Gene ID: 133212259, updated on 29-Mar-2024

Summary

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Gene symbol
ATG4C
Gene description
autophagy related 4C cysteine peptidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Neopsephotus bourkii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Neopsephotus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_12 current CSIRO-AGI_Nbou_v1 (GCF_033783945.1) Unplaced Scaffold NW_026901172.1 (2340248..2364360)

NW_026901172.1Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 7 Neighboring gene angiopoietin like 3 Neighboring gene uncharacterized LOC133212258 Neighboring gene uncharacterized LOC133212215 Neighboring gene forkhead box D3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026901172 Unplaced Scaffold Reference CSIRO-AGI_Nbou_v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine protease ATG4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033783945.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSIRO-AGI_Nbou_v1

Genomic

  1. NW_026901172.1 Reference CSIRO-AGI_Nbou_v1

    Range
    2340248..2364360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061353454.1 → XP_061209438.1  cysteine protease ATG4C isoform X1

  2. XM_061353455.1 → XP_061209439.1  cysteine protease ATG4C isoform X1

  3. XM_061353453.1 → XP_061209437.1  cysteine protease ATG4C isoform X1

  4. XM_061353458.1 → XP_061209442.1  cysteine protease ATG4C isoform X2

  5. XM_061353456.1 → XP_061209440.1  cysteine protease ATG4C isoform X1

  6. XM_061353457.1 → XP_061209441.1  cysteine protease ATG4C isoform X1

Nucleotide Protein
Heading Accession and Version

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