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alms1 ALMS1 centrosome and basal body associated protein [ Syngnathus typhle (broad-nosed pipefish) ]

Gene ID: 133169106, updated on 29-Mar-2024

Summary

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Gene symbol
alms1
Gene description
ALMS1 centrosome and basal body associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus typhle
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16
Exon count:
21
Annotation release Status Assembly LG Location
RS_2023_12 current RoL_Styp_1.0 (GCF_033458585.1) LG16 NC_083753.1 (2080531..2109636, complement)

Linkage Group LG16 - NC_083753.1Genomic Context describing neighboring genes Neighboring gene Abelson helper integration site 1 Neighboring gene ensconsin-like Neighboring gene otoferlin-like Neighboring gene dynactin subunit 1-like Neighboring gene nanos homolog 1-like Neighboring gene neuronal intermediate filament family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083753.1 Chromosome LG16 Reference RoL_Styp_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein alms1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033458585.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Styp_1.0

Genomic

  1. NC_083753.1 Reference RoL_Styp_1.0

    Range
    2080531..2109636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061301016.1 → XP_061157000.1  uncharacterized protein alms1 isoform X1

  2. XM_061301017.1 → XP_061157001.1  uncharacterized protein alms1 isoform X1

  3. XM_061301020.1 → XP_061157004.1  uncharacterized protein alms1 isoform X3

  4. XM_061301018.1 → XP_061157002.1  uncharacterized protein alms1 isoform X2

  5. XM_061301015.1 → XP_061156999.1  uncharacterized protein alms1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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