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AFP alpha fetoprotein [ Eubalaena glacialis (North Atlantic right whale) ]

Gene ID: 133092222, updated on 29-Mar-2024

Summary

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Gene symbol
AFP
Gene description
alpha fetoprotein
Gene type
protein coding
RefSeq status
MODEL
Organism
Eubalaena glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Eubalaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_12 current mEubGla1.1.hap2.+ XY (GCF_028564815.1) 5 NC_083720.1 (92281256..92301061)

Chromosome 5 - NC_083720.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX18, mitochondrial Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene ankyrin repeat domain 17 Neighboring gene albumin Neighboring gene alpha-fetoprotein-like Neighboring gene afamin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083720.1 Chromosome 5 Reference mEubGla1.1.hap2.+ XY Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-fetoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028564815.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEubGla1.1.hap2.+ XY Primary Assembly

Genomic

  1. NC_083720.1 Reference mEubGla1.1.hap2.+ XY Primary Assembly

    Range
    92281256..92301061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061191456.1 → XP_061047439.1  alpha-fetoprotein

Nucleotide Protein
Heading Accession and Version

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