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asphd2 aspartate beta-hydroxylase domain containing 2 [ Anoplopoma fimbria (sablefish) ]

Gene ID: 129101283, updated on 26-Mar-2024

Summary

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Gene symbol
asphd2
Gene description
aspartate beta-hydroxylase domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anoplopoma fimbria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma
Orthologs
human zebrafish all
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Genomic context

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See asphd2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current Afim_UVic_2022 (GCF_027596085.1) 13 NC_072461.1 (18401130..18406875)

Chromosome 13 - NC_072461.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 75Ba Neighboring gene gamma-glutamyltransferase 5a Neighboring gene calcium binding protein 1a Neighboring gene malectin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072461.1 Chromosome 13 Reference Afim_UVic_2022

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene. Rondeau EB, et al. BMC Genomics, 2013 Jul 6. PMID 23829495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in peptidyl-amino acid modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate beta-hydroxylase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027596085.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Afim_UVic_2022

Genomic

  1. NC_072461.1 Reference Afim_UVic_2022

    Range
    18401130..18406875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054611027.1 → XP_054467002.1  aspartate beta-hydroxylase domain-containing protein 2

  2. XM_054611028.1 → XP_054467003.1  aspartate beta-hydroxylase domain-containing protein 2

  3. XM_054611029.1 → XP_054467004.1  aspartate beta-hydroxylase domain-containing protein 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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