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LOC124904089 uncharacterized LOC124904089 [ Homo sapiens (human) ]

Gene ID: 124904089, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124904089
Gene description
uncharacterized LOC124904089
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
17q25.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (82273778..82278443)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (83142509..83146595)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:80195135-80195906 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80196677-80197447 Neighboring gene microRNA 6787 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12996 Neighboring gene casein kinase 1 delta Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:80210177-80211376 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80223561-80224292 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9204 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9205 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9206 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80234577-80235076 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9207 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9208 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12997 Neighboring gene long intergenic non-protein coding RNA 1970 Neighboring gene CSNK1D-CD7 intergenic CAGE-defined low expression enhancer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12998 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12999 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13000 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13001 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13002 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13003 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80261261-80261761 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80272095-80272682 Neighboring gene CD7 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    82273778..82278443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007065952.1 RNA Sequence

  2. XR_007065953.1 RNA Sequence

  3. XR_007065954.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    83142509..83146595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087786.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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