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ATP2C2 ATPase secretory pathway Ca2+ transporting 2 [ Protopterus annectens (West African lungfish) ]

Gene ID: 122809753, updated on 22-Mar-2024

Summary

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Gene symbol
ATP2C2
Gene description
ATPase secretory pathway Ca2+ transporting 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Protopterus annectens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus
Orthologs
human mouse all
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Genomic context

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See ATP2C2 in Genome Data Viewer
Location:
chromosome: 8.part0
Exon count:
27
Annotation release Status Assembly Chr Location
100 current PAN1.0 (GCF_019279795.1) 8.part0 NC_056741.1 (1949912368..1950541621, complement)

Chromosome 8.part0 - NC_056741.1Genomic Context describing neighboring genes Neighboring gene coactosin like F-actin binding protein 1 Neighboring gene MTOR associated protein, eak-7 homolog Neighboring gene WAP four-disulfide core domain 1 Neighboring gene carbohydrate sulfotransferase 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056741.1 Chromosome 8.part0 Reference PAN1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salamander-like tail regeneration in the West African lungfish. Verissimo KM, et al. Proc Biol Sci, 2020 Sep 30. PMID 32933441, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-transporting ATPase type 2C member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protopterus annectens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAN1.0 Primary Assembly

Genomic

  1. NC_056741.1 Reference PAN1.0 Primary Assembly

    Range
    1949912368..1950541621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044081473.1 → XP_043937408.1  calcium-transporting ATPase type 2C member 2

    Conserved Domains (1) summary
    cd02085
    Location:91 → 932
    P-type_ATPase_SPCA; golgi-associated secretory pathway Ca(2+) transport ATPases, similar to human ATPase secretory pathway Ca(2+) transporting 1/hSPCA1 and Saccharomyces cerevisiae Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p
Nucleotide Protein
Heading Accession and Version

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