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APOE apolipoprotein E [ Protopterus annectens (West African lungfish) ]

Gene ID: 122809300, updated on 22-Mar-2024

Summary

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Gene symbol
APOE
Gene description
apolipoprotein E
Gene type
protein coding
RefSeq status
MODEL
Organism
Protopterus annectens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Dipnomorpha; Ceratodontiformes; Lepidosirenoidei; Protopteridae; Protopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8.part0
Exon count:
5
Annotation release Status Assembly Chr Location
100 current PAN1.0 (GCF_019279795.1) 8.part0 NC_056741.1 (1196849660..1196966623)

Chromosome 8.part0 - NC_056741.1Genomic Context describing neighboring genes Neighboring gene translocase of outer mitochondrial membrane 40 Neighboring gene apolipoprotein A-IV-like Neighboring gene trypsin-like Neighboring gene trypsin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056741.1 Chromosome 8.part0 Reference PAN1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salamander-like tail regeneration in the West African lungfish. Verissimo KM, et al. Proc Biol Sci, 2020 Sep 30. PMID 32933441, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of neuron apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nitric-oxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of amyloid-beta clearance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intermediate-density lipoprotein particle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protopterus annectens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAN1.0 Primary Assembly

Genomic

  1. NC_056741.1 Reference PAN1.0 Primary Assembly

    Range
    1196849660..1196966623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044080687.1 → XP_043936622.1  apolipoprotein E

  2. XM_044080685.1 → XP_043936620.1  apolipoprotein E

  3. XM_044080686.1 → XP_043936621.1  apolipoprotein E

Nucleotide Protein
Heading Accession and Version

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