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aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122771313, updated on 22-Mar-2024

Summary

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Gene symbol
aspscr1
Gene description
ASPSCR1 tether for SLC2A4, UBX domain containing
Locus tag
JOB18_029086
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG6
Exon count:
19
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG6 NC_058026.1 (5702192..5725652)

Linkage Group LG6 - NC_058026.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel-like 6b Neighboring gene notum, palmitoleoyl-protein carboxylesterase b Neighboring gene myeloid-associated differentiation marker-like protein 2 Neighboring gene pyrroline-5-carboxylate reductase 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058026.1 Chromosome LG6 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tether containing UBX domain for GLUT4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058026.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    5702192..5725652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044028811.1 → XP_043884746.1  tether containing UBX domain for GLUT4 isoform X2

    Conserved Domains (3) summary
    cd16105
    Location:8 → 77
    Ubl_ASPSCR1_like; Ubiquitin-like (Ubl) domain found at the N-terminus of mammalian ASPSCR1 (alveolar soft part sarcoma chromosomal region candidate gene 1 protein), Saccharomyces cerevisie Ubx4p, and similar proteins
    cd16118
    Location:441 → 503
    UBX2_UBXN9; Ubiquitin regulatory domain X (UBX) 2 found in UBX domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar proteins
    cd17075
    Location:86 → 167
    UBX1_UBXN9; Ubiquitin regulatory domain X (UBX) 1 found in UBX domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar proteins

  2. XM_044028810.1 → XP_043884745.1  tether containing UBX domain for GLUT4 isoform X1

    Conserved Domains (3) summary
    cd16105
    Location:8 → 77
    Ubl_ASPSCR1_like; Ubiquitin-like (Ubl) domain found at the N-terminus of mammalian ASPSCR1 (alveolar soft part sarcoma chromosomal region candidate gene 1 protein), Saccharomyces cerevisie Ubx4p, and similar proteins
    cd16118
    Location:441 → 514
    UBX2_UBXN9; Ubiquitin regulatory domain X (UBX) 2 found in UBX domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar proteins
    cd17075
    Location:86 → 167
    UBX1_UBXN9; Ubiquitin regulatory domain X (UBX) 1 found in UBX domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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