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APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A [ Cervus elaphus (red deer) ]

Gene ID: 122680528, updated on 2-May-2024

Summary

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Gene symbol
APOBEC3A
Gene description
apolipoprotein B mRNA editing enzyme catalytic subunit 3A
See related
EnsemblRapid:ENSCESG00005024080
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus elaphus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human all
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Genomic context

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Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
100 current mCerEla1.1 (GCF_910594005.1) 22 NC_057836.1 (9469565..9473396, complement)

Chromosome 22 - NC_057836.1Genomic Context describing neighboring genes Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene uncharacterized LOC122680530 Neighboring gene U6 spliceosomal RNA Neighboring gene chromobox 6 Neighboring gene neuronal pentraxin receptor Neighboring gene dynein axonemal light chain 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057836.1 Chromosome 22 Reference mCerEla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA cytosine deamination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of single stranded viral RNA replication via double stranded DNA intermediate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA dC->dU-editing enzyme APOBEC-3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus elaphus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCerEla1.1

Genomic

  1. NC_057836.1 Reference mCerEla1.1

    Range
    9469565..9473396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043882025.1 → XP_043737960.1  DNA dC->dU-editing enzyme APOBEC-3A

    Related
    ENSCESP00005032062.1, ENSCEST00005037443.1
Nucleotide Protein
Heading Accession and Version

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